Scanpy

Since we take inspiration from the scanpy tool in our data structure and conventions, many of its methods can be used on our vote matrix data.

For convenience, we make all scanpy's methods available like so:

import valency_anndata as val

val.scanpy.logging.print_header()

This is functionally equivalent to:

import scanpy as sc

sc.logging.print_header()

See scanpy for more methods you can experiment with via the val.scanpy namespace.